ClinVar Miner

Submissions for variant NM_005633.4(SOS1):c.3439G>A (p.Val1147Met)

dbSNP: rs2528879107
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV002651536 SCV003524814 uncertain significance RASopathy 2023-08-14 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Not Available"; PolyPhen-2: "Benign"; Align-GVGD: "Not Available". The methionine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. ClinVar contains an entry for this variant (Variation ID: 2203177). This variant has not been reported in the literature in individuals affected with SOS1-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces valine, which is neutral and non-polar, with methionine, which is neutral and non-polar, at codon 1147 of the SOS1 protein (p.Val1147Met).
Ambry Genetics RCV004992555 SCV005506089 uncertain significance Cardiovascular phenotype 2024-07-11 criteria provided, single submitter clinical testing The p.V1147M variant (also known as c.3439G>A), located in coding exon 22 of the SOS1 gene, results from a G to A substitution at nucleotide position 3439. The valine at codon 1147 is replaced by methionine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Based on the available evidence, the clinical significance of this variant remains unclear.

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