ClinVar Miner

Submissions for variant NM_005732.4(RAD50):c.2273A>G (p.Asn758Ser)

gnomAD frequency: 0.00001  dbSNP: rs147568421
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV000221274 SCV000276975 uncertain significance Hereditary cancer-predisposing syndrome 2023-03-25 criteria provided, single submitter clinical testing The p.N758S variant (also known as c.2273A>G), located in coding exon 14 of the RAD50 gene, results from an A to G substitution at nucleotide position 2273. The asparagine at codon 758 is replaced by serine, an amino acid with highly similar properties. This amino acid position is highly conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Invitae RCV000221274 SCV000547962 uncertain significance Hereditary cancer-predisposing syndrome 2023-11-08 criteria provided, single submitter clinical testing This sequence change replaces asparagine, which is neutral and polar, with serine, which is neutral and polar, at codon 758 of the RAD50 protein (p.Asn758Ser). This variant is present in population databases (rs147568421, gnomAD 0.004%). This variant has not been reported in the literature in individuals affected with RAD50-related conditions. ClinVar contains an entry for this variant (Variation ID: 232761). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt RAD50 protein function with a negative predictive value of 80%. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Cancer Genomics Group, Japanese Foundation For Cancer Research RCV001030507 SCV001193707 uncertain significance Hereditary breast ovarian cancer syndrome 2019-05-01 criteria provided, single submitter research
Baylor Genetics RCV003462503 SCV004207408 uncertain significance Nijmegen breakage syndrome-like disorder 2023-05-05 criteria provided, single submitter clinical testing

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