ClinVar Miner

Submissions for variant NM_006005.3(WFS1):c.1779G>C (p.Glu593Asp)

gnomAD frequency: 0.00063  dbSNP: rs144783536
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Total submissions: 9
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV001705134 SCV000252491 likely benign not provided 2021-01-11 criteria provided, single submitter clinical testing
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000196541 SCV000271193 likely benign not specified 2016-02-07 criteria provided, single submitter clinical testing p.Glu593Asp in exon 8 of WFS1: This variant is not expected to have clinical si gnificance due to a lack of conservation across species, including mammals. Of n ote, 10 mammals have an aspartic acid (Asp) at this position despite high nearby amino acid conservation. In addition, computational prediction tools do not sug gest a high likelihood of impact to the protein. It has been identified in 0.2% (19/10398) of African chromosomes by the Exome Aggregation Consortium (ExAC, htt p://exac.broadinstitute.org; dbSNP rs144783536).
Eurofins Ntd Llc (ga) RCV000196541 SCV000343653 likely benign not specified 2016-08-17 criteria provided, single submitter clinical testing
Labcorp Genetics (formerly Invitae), Labcorp RCV001705134 SCV002409277 benign not provided 2023-11-27 criteria provided, single submitter clinical testing
Clinical Genomics, Uppaluri K&H Personalized Medicine Clinic RCV003126582 SCV003801430 uncertain significance Wolfram syndrome 1 criteria provided, single submitter research Potent mutations in WFS1 gene are associated with Wolfram's syndrome, an autosomal recessive condition, which cause diabetes mellitus, diabetes insipidus, deafness and optic atrophy.However no sufficient evidence is found to ascertain the role of this particular variant rs144783536 in Wolfram's syndrome yet.
PreventionGenetics, part of Exact Sciences RCV004541267 SCV004772310 likely benign WFS1-related disorder 2022-05-20 criteria provided, single submitter clinical testing This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Ambry Genetics RCV004020436 SCV004979914 likely benign Inborn genetic diseases 2021-06-25 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Clinical Genetics, Academic Medical Center RCV001705134 SCV002034439 likely benign not provided no assertion criteria provided clinical testing
Laboratory of Diagnostic Genome Analysis, Leiden University Medical Center (LUMC) RCV001705134 SCV002036975 likely benign not provided no assertion criteria provided clinical testing

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