ClinVar Miner

Submissions for variant NM_006158.5(NEFL):c.1597G>C (p.Ala533Pro)

gnomAD frequency: 0.00003  dbSNP: rs371037868
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001313029 SCV001503504 uncertain significance Charcot-Marie-Tooth disease type 2E 2022-12-14 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) has been performed at Invitae for this missense variant, however the output from this modeling did not meet the statistical confidence thresholds required to predict the impact of this variant on NEFL protein function. ClinVar contains an entry for this variant (Variation ID: 1014315). This variant has not been reported in the literature in individuals affected with NEFL-related conditions. This variant is present in population databases (rs371037868, gnomAD 0.08%). This sequence change replaces alanine, which is neutral and non-polar, with proline, which is neutral and non-polar, at codon 533 of the NEFL protein (p.Ala533Pro).

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