Total submissions: 2
| Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
|---|---|---|---|---|---|---|---|---|
| Ambry Genetics | RCV001015862 | SCV001176743 | uncertain significance | Hereditary cancer-predisposing syndrome | 2023-07-30 | criteria provided, single submitter | clinical testing | The p.M844T variant (also known as c.2531T>C), located in coding exon 17 of the PDGFRA gene, results from a T to C substitution at nucleotide position 2531. The methionine at codon 844 is replaced by threonine, an amino acid with similar properties. This amino acid position is highly conserved in available vertebrate species. In addition, this alteration is predicted to be deleterious by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear. |
| Labcorp Genetics |
RCV001860805 | SCV002279485 | uncertain significance | Gastrointestinal stromal tumor | 2022-12-29 | criteria provided, single submitter | clinical testing | In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt PDGFRA protein function. ClinVar contains an entry for this variant (Variation ID: 821444). This variant has not been reported in the literature in individuals affected with PDGFRA-related conditions. This variant is present in population databases (rs758210670, gnomAD 0.003%). This sequence change replaces methionine, which is neutral and non-polar, with threonine, which is neutral and polar, at codon 844 of the PDGFRA protein (p.Met844Thr). |