ClinVar Miner

Submissions for variant NM_006218.4(PIK3CA):c.3139C>T (p.His1047Tyr) (rs121913281)

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Total submissions: 28
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Laboratory for Molecular Medicine, Partners HealthCare Personalized Medicine RCV000038675 SCV000062353 pathogenic Non-small cell lung cancer 2011-03-01 criteria provided, single submitter clinical testing This variant has been observed and confirmed as a somatic variant in large intestine, endometrium, breast and ovarian tumors (COSMIC). Somatic PIK3CA variants have been identified in up to 4% of cases of lung cancer (Samuels 2004).
Invitae RCV000698423 SCV000827084 pathogenic Cowden syndrome 2019-09-24 criteria provided, single submitter clinical testing This sequence change replaces histidine with tyrosine at codon 1047 of the PIK3CA protein (p.His1047Tyr). The histidine residue is highly conserved and there is a moderate physicochemical difference between histidine and tyrosine. This variant is not present in population databases (ExAC no frequency). This variant has been reported to be mosaic in individuals affected with megalencephaly-capillary malformation syndrome (PMID: 22729224, 27631024). ClinVar contains an entry for this variant (Variation ID: 39705). Experimental studies have shown that this missense change results in increased kinase activity in vitro and in cultured cells (PMID: 17376864). For these reasons, this variant has been classified as Pathogenic.
Fulgent Genetics,Fulgent Genetics RCV000763508 SCV000894305 pathogenic Familial cancer of breast; Megalencephaly-capillary malformation-polymicrogyria syndrome; Lung cancer; Congenital macrodactylia; Seborrheic keratosis; Epidermal nevus; Neoplasm of ovary; Capillary malformation of the lower lip, lymphatic malformation of face and neck, asymmetry of face and limbs, and partial/generalized overgrowth; Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi; Carcinoma of colon; Neoplasm of stomach; Cowden syndrome 5; Hepatocellular carcinoma 2018-10-31 criteria provided, single submitter clinical testing
CeGaT Praxis fuer Humangenetik Tuebingen RCV001092441 SCV001248957 pathogenic not provided 2018-07-01 criteria provided, single submitter clinical testing
OMIM RCV000032909 SCV000056681 pathogenic Megalencephaly-capillary malformation-polymicrogyria syndrome 2012-06-24 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000425809 SCV000504943 likely pathogenic Malignant melanoma of skin 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000436090 SCV000504944 likely pathogenic Ovarian Serous Cystadenocarcinoma 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000418438 SCV000504945 likely pathogenic Hepatocellular carcinoma 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000425119 SCV000504946 likely pathogenic Adenocarcinoma of stomach 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000435399 SCV000504947 likely pathogenic Brainstem glioma 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000417782 SCV000504948 likely pathogenic Medulloblastoma 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000428005 SCV000504949 likely pathogenic Glioblastoma 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000441716 SCV000504950 likely pathogenic Pancreatic adenocarcinoma 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000420550 SCV000504951 likely pathogenic Malignant tumor of floor of mouth 2015-07-14 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000430750 SCV000504952 likely pathogenic Carcinoma of esophagus 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000441028 SCV000504953 likely pathogenic Neoplasm of the breast 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000423369 SCV000504954 likely pathogenic Malignant neoplasm of body of uterus 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000433635 SCV000504955 likely pathogenic Uterine cervical neoplasms 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000440398 SCV000504956 likely pathogenic Squamous cell carcinoma of the head and neck 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000422744 SCV000504957 likely pathogenic Adenocarcinoma of prostate 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000432906 SCV000504958 likely pathogenic Uterine Carcinosarcoma 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000442782 SCV000504959 likely pathogenic Renal cell carcinoma, papillary, 1 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000425540 SCV000504960 likely pathogenic Squamous cell lung carcinoma 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000432323 SCV000504961 likely pathogenic Lung adenocarcinoma 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000441963 SCV000504962 likely pathogenic Neoplasm of the large intestine 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000424877 SCV000504963 likely pathogenic Neoplasm of brain 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000435124 SCV000504964 likely pathogenic Transitional cell carcinoma of the bladder 2016-05-31 no assertion criteria provided literature only
Database of Curated Mutations (DoCM) RCV000444680 SCV000504965 likely pathogenic Adrenocortical carcinoma 2016-05-31 no assertion criteria provided literature only

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