ClinVar Miner

Submissions for variant NM_006267.5(RANBP2):c.1231G>A (p.Val411Ile)

gnomAD frequency: 0.00016  dbSNP: rs139907041
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001059201 SCV001223818 uncertain significance Familial acute necrotizing encephalopathy 2019-04-04 criteria provided, single submitter clinical testing Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The isoleucine amino acid residue is found in multiple mammalian species, suggesting that this missense change does not adversely affect protein function. These predictions have not been confirmed by published functional studies and their clinical significance is uncertain. This variant has not been reported in the literature in individuals with RANBP2-related conditions. This variant is present in population databases (rs139907041, ExAC 0.05%). This sequence change replaces valine with isoleucine at codon 411 of the RANBP2 protein (p.Val411Ile). The valine residue is weakly conserved and there is a small physicochemical difference between valine and isoleucine. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV004031872 SCV003740451 uncertain significance not specified 2022-06-03 criteria provided, single submitter clinical testing The c.1231G>A (p.V411I) alteration is located in exon 9 (coding exon 9) of the RANBP2 gene. This alteration results from a G to A substitution at nucleotide position 1231, causing the valine (V) at amino acid position 411 to be replaced by an isoleucine (I). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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