ClinVar Miner

Submissions for variant NM_006493.4(CLN5):c.713_720del (p.Thr238fs)

dbSNP: rs1555274344
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Counsyl RCV000667867 SCV000792379 likely pathogenic Neuronal ceroid lipofuscinosis 5 2017-06-15 criteria provided, single submitter clinical testing
Invitae RCV001855490 SCV002148046 pathogenic Neuronal ceroid lipofuscinosis 2020-12-28 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. This variant disrupts the C-terminus of the CLN5 protein. Other variant(s) that disrupt this region (p.Phe325Trpfs*26) have been determined to be pathogenic (Invitae). This suggests that variants that disrupt this region of the protein are likely to be causative of disease. This variant has not been reported in the literature in individuals with CLN5-related conditions. ClinVar contains an entry for this variant (Variation ID: 552578). This variant is not present in population databases (ExAC no frequency). This sequence change creates a premature translational stop signal (p.Thr287Lysfs*4) in the CLN5 gene. While this is not anticipated to result in nonsense mediated decay, it is expected to disrupt the last 121 amino acid(s) of the CLN5 protein.

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