ClinVar Miner

Submissions for variant NM_006642.5(SDCCAG8):c.1147C>T (p.Gln383Ter)

gnomAD frequency: 0.00001  dbSNP: rs964673995
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001384058 SCV001583431 pathogenic Senior-Loken syndrome 7; Bardet-Biedl syndrome 16 2022-08-22 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may create or strengthen a splice site. ClinVar contains an entry for this variant (Variation ID: 1071556). This variant has not been reported in the literature in individuals affected with SDCCAG8-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change creates a premature translational stop signal (p.Gln383*) in the SDCCAG8 gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in SDCCAG8 are known to be pathogenic (PMID: 20835237, 22190896).
Fulgent Genetics, Fulgent Genetics RCV001384058 SCV002813312 likely pathogenic Senior-Loken syndrome 7; Bardet-Biedl syndrome 16 2022-03-14 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV004734163 SCV005341706 likely pathogenic SDCCAG8-related disorder 2024-02-27 no assertion criteria provided clinical testing The SDCCAG8 c.1147C>T variant is predicted to result in premature protein termination (p.Gln383*). This variant has not been reported in a large population database, indicating this variant is rare. Nonsense variants in SDCCAG8 are expected to be pathogenic. This variant is interpreted as likely pathogenic.

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