ClinVar Miner

Submissions for variant NM_006642.5(SDCCAG8):c.832C>T (p.Arg278Cys)

gnomAD frequency: 0.00009  dbSNP: rs769004589
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV002033710 SCV002270107 uncertain significance Senior-Loken syndrome 7; Bardet-Biedl syndrome 16 2022-11-22 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is not expected to disrupt SDCCAG8 protein function. ClinVar contains an entry for this variant (Variation ID: 1488083). This variant has not been reported in the literature in individuals affected with SDCCAG8-related conditions. This variant is present in population databases (rs769004589, gnomAD 0.03%). This sequence change replaces arginine, which is basic and polar, with cysteine, which is neutral and slightly polar, at codon 278 of the SDCCAG8 protein (p.Arg278Cys).
Fulgent Genetics, Fulgent Genetics RCV002033710 SCV002781878 uncertain significance Senior-Loken syndrome 7; Bardet-Biedl syndrome 16 2021-07-09 criteria provided, single submitter clinical testing
Ambry Genetics RCV003303581 SCV003976788 uncertain significance Inborn genetic diseases 2023-05-03 criteria provided, single submitter clinical testing The c.832C>T (p.R278C) alteration is located in exon 8 (coding exon 8) of the SDCCAG8 gene. This alteration results from a C to T substitution at nucleotide position 832, causing the arginine (R) at amino acid position 278 to be replaced by a cysteine (C). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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