ClinVar Miner

Submissions for variant NM_006846.4(SPINK5):c.1605G>T (p.Val535=)

gnomAD frequency: 0.00259  dbSNP: rs201831966
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Illumina Laboratory Services, Illumina RCV000385259 SCV000453762 likely benign Netherton syndrome 2018-01-12 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as likely benign is not then subjected to further curation. The score for this variant resulted in a classification of likely benign for this disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV003761920 SCV001035836 benign Ichthyosis linearis circumflexa 2024-01-29 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV002061260 SCV002497360 likely benign not provided 2022-03-01 criteria provided, single submitter clinical testing SPINK5: BP4, BP7

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