ClinVar Miner

Submissions for variant NM_006904.7(PRKDC):c.140G>T (p.Ser47Ile)

dbSNP: rs1328149805
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV004057174 SCV002702527 uncertain significance not specified 2021-08-24 criteria provided, single submitter clinical testing The p.S47I variant (also known as c.140G>T), located in coding exon 1 of the PRKDC gene, results from a G to T substitution at nucleotide position 140. The serine at codon 47 is replaced by isoleucine, an amino acid with dissimilar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Labcorp Genetics (formerly Invitae), Labcorp RCV003095115 SCV002967737 uncertain significance Severe combined immunodeficiency due to DNA-PKcs deficiency 2022-10-05 criteria provided, single submitter clinical testing Experimental studies and prediction algorithms are not available or were not evaluated, and the functional significance of this variant is currently unknown. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. This variant has not been reported in the literature in individuals affected with PRKDC-related conditions. This sequence change replaces serine, which is neutral and polar, with isoleucine, which is neutral and non-polar, at codon 47 of the PRKDC protein (p.Ser47Ile). The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the gnomAD database.

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