ClinVar Miner

Submissions for variant NM_006904.7(PRKDC):c.2662A>G (p.Arg888Gly)

gnomAD frequency: 0.00001  dbSNP: rs371388640
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001237354 SCV001410111 uncertain significance Severe combined immunodeficiency due to DNA-PKcs deficiency 2022-08-31 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. ClinVar contains an entry for this variant (Variation ID: 963342). This variant has not been reported in the literature in individuals affected with PRKDC-related conditions. This variant is present in population databases (rs371388640, gnomAD 0.003%). This sequence change replaces arginine, which is basic and polar, with glycine, which is neutral and non-polar, at codon 888 of the PRKDC protein (p.Arg888Gly).
Ambry Genetics RCV002436929 SCV002744823 uncertain significance Inborn genetic diseases 2021-09-15 criteria provided, single submitter clinical testing The p.R888G variant (also known as c.2662A>G), located in coding exon 24 of the PRKDC gene, results from an A to G substitution at nucleotide position 2662. The arginine at codon 888 is replaced by glycine, an amino acid with dissimilar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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