ClinVar Miner

Submissions for variant NM_006950.3(SYN1):c.169G>A (p.Val57Ile)

dbSNP: rs1200321961
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001049251 SCV001213294 uncertain significance Epilepsy, X-linked 1, with variable learning disabilities and behavior disorders 2024-01-17 criteria provided, single submitter clinical testing This sequence change replaces valine, which is neutral and non-polar, with isoleucine, which is neutral and non-polar, at codon 57 of the SYN1 protein (p.Val57Ile). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with SYN1-related conditions. ClinVar contains an entry for this variant (Variation ID: 846048). An algorithm developed to predict the effect of missense changes on protein structure and function (PolyPhen-2) suggests that this variant is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV003307849 SCV003990401 uncertain significance Inborn genetic diseases 2023-06-05 criteria provided, single submitter clinical testing The c.169G>A (p.V57I) alteration is located in exon 1 (coding exon 1) of the SYN1 gene. This alteration results from a G to A substitution at nucleotide position 169, causing the valine (V) at amino acid position 57 to be replaced by an isoleucine (I). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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