ClinVar Miner

Submissions for variant NM_007078.3(LDB3):c.1035C>T (p.Ile345=)

gnomAD frequency: 0.00029  dbSNP: rs121908336
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Total submissions: 13
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000150924 SCV000170113 benign not specified 2014-05-13 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000150924 SCV000198560 likely benign not specified 2014-11-06 criteria provided, single submitter clinical testing p.Ile345Ile in exon 10 of LDB3: This variant is not expected to have clinical si gnificance because it does not alter an amino acid residue and is not located wi thin the splice consensus sequence. It has been identified in 7/8600 of European American chromosomes by the NHLBI Exome Sequencing Project (http://evs.gs.washi ngton.edu/EVS/; dbSNP rs121908336).
PreventionGenetics, part of Exact Sciences RCV000150924 SCV000311688 benign not specified criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV000996134 SCV001150620 likely benign not provided 2022-09-01 criteria provided, single submitter clinical testing LDB3: BP4, BP7
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV000996134 SCV001471444 likely benign not provided 2020-06-02 criteria provided, single submitter clinical testing
Invitae RCV001483220 SCV001687605 likely benign Myofibrillar myopathy 4 2024-01-29 criteria provided, single submitter clinical testing
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV000150924 SCV002041719 benign not specified 2021-11-15 criteria provided, single submitter clinical testing
Ambry Genetics RCV002390285 SCV002698404 likely benign Cardiovascular phenotype 2018-11-20 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen RCV000996134 SCV001742708 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics, Academic Medical Center RCV000150924 SCV001918799 benign not specified no assertion criteria provided clinical testing
Genome Diagnostics Laboratory, University Medical Center Utrecht RCV000996134 SCV001927248 likely benign not provided no assertion criteria provided clinical testing
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ RCV000996134 SCV001959938 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000996134 SCV001967026 likely benign not provided no assertion criteria provided clinical testing

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