ClinVar Miner

Submissions for variant NM_007078.3(LDB3):c.1672A>G (p.Ile558Val)

gnomAD frequency: 0.00003  dbSNP: rs372331627
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Total submissions: 13
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Biesecker Lab/Clinical Genomics Section, National Institutes of Health RCV000171998 SCV000054757 uncertain significance not provided 2013-06-24 criteria provided, single submitter research
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000038741 SCV000062419 likely benign not specified 2015-06-11 criteria provided, single submitter clinical testing p.Ile558Val in exon 9 of LDB3: This variant is not expected to have clinical sig nificance because it has been identified in 0.3% (40/12734) South Asian chromoso mes by the Exome Aggregation Consortium (ExAC, http://exac.broadinstitute.org; d bSNP rs372331627).
GeneDx RCV000171998 SCV000236009 benign not provided 2020-09-30 criteria provided, single submitter clinical testing This variant is associated with the following publications: (PMID: 25179549, 24503780, 26112015, 27896284, 20474083, 25351510, 27633507, 27884173, 30315573, 31127727)
Center for Advanced Laboratory Medicine, UC San Diego Health, University of California San Diego RCV000852622 SCV000995326 likely benign Arrhythmogenic right ventricular cardiomyopathy 2019-03-18 criteria provided, single submitter clinical testing
Mendelics RCV000988404 SCV001138109 benign Myofibrillar myopathy 4 2023-08-22 criteria provided, single submitter clinical testing
CHEO Genetics Diagnostic Laboratory, Children's Hospital of Eastern Ontario RCV001170179 SCV001332729 benign Cardiomyopathy 2017-11-30 criteria provided, single submitter clinical testing
Invitae RCV000988404 SCV002372738 benign Myofibrillar myopathy 4 2023-12-11 criteria provided, single submitter clinical testing
Ambry Genetics RCV002399380 SCV002708526 likely benign Cardiovascular phenotype 2020-09-03 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
CeGaT Center for Human Genetics Tuebingen RCV000171998 SCV004127016 likely benign not provided 2023-04-01 criteria provided, single submitter clinical testing LDB3: BS1
Clinical Genetics, Academic Medical Center RCV000171998 SCV001925714 uncertain significance not provided no assertion criteria provided clinical testing
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ RCV000171998 SCV001953608 uncertain significance not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV000171998 SCV001965907 uncertain significance not provided no assertion criteria provided clinical testing
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen RCV000171998 SCV002034882 uncertain significance not provided no assertion criteria provided clinical testing

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