ClinVar Miner

Submissions for variant NM_007078.3(LDB3):c.2142C>A (p.Asp714Glu)

gnomAD frequency: 0.00001  dbSNP: rs1054918785
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001238916 SCV001411749 uncertain significance Myofibrillar myopathy 4 2023-04-10 criteria provided, single submitter clinical testing This sequence change replaces aspartic acid, which is acidic and polar, with glutamic acid, which is acidic and polar, at codon 714 of the LDB3 protein (p.Asp714Glu). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Experimental studies and prediction algorithms are not available or were not evaluated, and the functional significance of this variant is currently unknown. This variant has not been reported in the literature in individuals affected with LDB3-related conditions. This variant is not present in population databases (gnomAD no frequency). The LDB3 gene has multiple clinically relevant transcripts. This variant occurs in alternate transcript NM_007078.3, and corresponds to NM_001080116.1:c.*33560C>A in the primary transcript.
Ambry Genetics RCV002430020 SCV002730097 uncertain significance Cardiovascular phenotype 2020-09-17 criteria provided, single submitter clinical testing The p.D714E variant (also known as c.2142C>A), located in coding exon 13 of the LDB3 gene, results from a C to A substitution at nucleotide position 2142. The aspartic acid at codon 714 is replaced by glutamic acid, an amino acid with highly similar properties. This amino acid position is highly conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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