ClinVar Miner

Submissions for variant NM_007294.4(BRCA1):c.122_134delinsT (p.His41_Lys45delinsLeu)

dbSNP: rs1555599205
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000527927 SCV000635783 likely pathogenic Hereditary breast ovarian cancer syndrome 2022-10-28 criteria provided, single submitter clinical testing This variant, c.122_134delinsT, is a complex sequence change that results in the deletion of last 5 amino acid residues of exon 3 BRCA1 protein and insertion of 1 amino acid(s) in the BRCA1 protein (p.His41_Lys45delinsLeu). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with BRCA1-related conditions. Experimental studies and prediction algorithms are not available or were not evaluated, and the functional significance of this variant is currently unknown. Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site. This variant disrupts the p.Cys44 amino acid residue in BRCA1. Other variant(s) that disrupt this residue have been determined to be pathogenic (PMID: 15168169, 18159056, 21922593, 23633455, 24489791, 25777348, 25823446, 27083775, 1626703619543972). This suggests that this residue is clinically significant, and that variants that disrupt this residue are likely to be disease-causing. In summary, the currently available evidence indicates that the variant is pathogenic, but additional data are needed to prove that conclusively. Therefore, this variant has been classified as Likely Pathogenic.

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