Total submissions: 2
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Invitae | RCV000811849 | SCV000952137 | uncertain significance | Hereditary breast ovarian cancer syndrome | 2018-12-27 | criteria provided, single submitter | clinical testing | This sequence change replaces valine with alanine at codon 1688 of the BRCA1 protein (p.Val1688Ala). The valine residue is weakly conserved and there is a small physicochemical difference between valine and alanine. This variant is not present in population databases (ExAC no frequency). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. This variant disrupts the p.Val1688del amino acid residue in BRCA1. Other variant(s) that disrupt this residue have been observed in individuals with BRCA1-related conditions (PMID: 18165637, 19706752, 18821011, 8968102, 18703817, 23697973, 25814778, 26306726, 23867111, 11157798, 17924331, 21990134), suggesting that it is a clinically significant residue. As a result, variants that disrupt this residue are likely to be causative of disease. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive, but these predictions have not been confirmed by published functional studies and their clinical significance is uncertain. This variant has not been reported in the literature in individuals with BRCA1-related conditions. |
Brotman Baty Institute, |
RCV001077989 | SCV001244004 | not provided | Breast-ovarian cancer, familial, susceptibility to, 1 | no assertion provided | in vitro |