ClinVar Miner

Submissions for variant NM_007294.4(BRCA1):c.5458G>A (p.Gly1820Ser)

dbSNP: rs398122698
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Ambry Genetics RCV000222285 SCV000276995 likely benign Hereditary cancer-predisposing syndrome 2019-12-20 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Color Diagnostics, LLC DBA Color Health RCV000222285 SCV000908980 uncertain significance Hereditary cancer-predisposing syndrome 2019-05-15 criteria provided, single submitter clinical testing
Invitae RCV000814710 SCV000955130 uncertain significance Hereditary breast ovarian cancer syndrome 2023-11-10 criteria provided, single submitter clinical testing This sequence change replaces glycine, which is neutral and non-polar, with serine, which is neutral and polar, at codon 1820 of the BRCA1 protein (p.Gly1820Ser). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with BRCA1-related conditions. ClinVar contains an entry for this variant (Variation ID: 91650). Advanced modeling performed at Invitae incorporating data from internal and/or published experimental studies (PMID: 30209399) indicates that this missense variant is not expected to disrupt BRCA1 function with a negative predictive value of 95%. Experimental studies have shown that this missense change does not substantially affect BRCA1 function (PMID: 30209399, 30257991). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Mendelics RCV000077167 SCV001140465 uncertain significance Breast-ovarian cancer, familial, susceptibility to, 1 2019-05-28 criteria provided, single submitter clinical testing
MGZ Medical Genetics Center RCV003607233 SCV004543880 uncertain significance Familial cancer of breast 2024-02-09 criteria provided, single submitter clinical testing ACMG codes applied following ENIGMA VCEP rules: PP3, PS1_MOD, PM2_SUP, BS3, BP4
Sharing Clinical Reports Project (SCRP) RCV000077167 SCV000108964 uncertain significance Breast-ovarian cancer, familial, susceptibility to, 1 2012-08-30 no assertion criteria provided clinical testing
Brotman Baty Institute, University of Washington RCV000077167 SCV001243915 not provided Breast-ovarian cancer, familial, susceptibility to, 1 no assertion provided in vitro

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