Submissions for variant NM_012232.6(CAVIN1):c.927G>A (p.Ala309=)

gnomAD frequency: 0.01816  dbSNP: rs112332573

Total submissions: 6

Submitter	RCV	SCV	Clinical significance	Condition	Last evaluated	Review status	Method	Comment
Illumina Laboratory Services, Illumina	RCV000324266	SCV000402881	benign	Congenital generalized lipodystrophy type 4	2018-01-13	criteria provided, single submitter	clinical testing	This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score and internal cut-off values, a variant classified as benign is not then subjected to further curation. The score for this variant resulted in a classification of benign for this disease.
Labcorp Genetics (formerly Invitae), Labcorp	RCV000965383	SCV001112649	benign	not provided	2019-12-31	criteria provided, single submitter	clinical testing
Athena Diagnostics	RCV000118084	SCV001476795	benign	not specified	2019-12-31	criteria provided, single submitter	clinical testing
GeneDx	RCV000965383	SCV001751659	benign	not provided	2019-10-07	criteria provided, single submitter	clinical testing
Breakthrough Genomics, Breakthrough Genomics	RCV000965383	SCV005250402	benign	not provided		criteria provided, single submitter	not provided
Genetic Services Laboratory, University of Chicago	RCV000118084	SCV000152416	likely benign	not specified		no assertion criteria provided	clinical testing	Likely benign based on allele frequency in 1000 Genomes Project or ESP global frequency and its presence in a patient with a rare or unrelated disease phenotype. NOT Sanger confirmed.