ClinVar Miner

Submissions for variant NM_012275.3(IL36RN):c.244-5G>A

gnomAD frequency: 0.00007  dbSNP: rs754661425
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001037461 SCV001200875 uncertain significance Generalized pustular psoriasis 2022-05-30 criteria provided, single submitter clinical testing This sequence change falls in intron 4 of the IL36RN gene. It does not directly change the encoded amino acid sequence of the IL36RN protein. This variant is present in population databases (rs754661425, gnomAD 0.01%). This variant has not been reported in the literature in individuals affected with IL36RN-related conditions. ClinVar contains an entry for this variant (Variation ID: 836349). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Illumina Laboratory Services, Illumina RCV001037461 SCV001288880 uncertain significance Generalized pustular psoriasis 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV002264148 SCV002543476 uncertain significance Autoinflammatory syndrome 2021-03-26 criteria provided, single submitter clinical testing

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