ClinVar Miner

Submissions for variant NM_014244.5(ADAMTS2):c.110C>T (p.Ala37Val)

gnomAD frequency: 0.00004  dbSNP: rs1057524401
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Total submissions: 6
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000431296 SCV000535468 uncertain significance not provided 2021-08-03 criteria provided, single submitter clinical testing Has not been previously published as pathogenic or benign to our knowledge; Not observed at significant frequency in large population cohorts (Lek et al., 2016); In silico analysis supports that this missense variant does not alter protein structure/function; This variant is associated with the following publications: (PMID: 26582918)
Fulgent Genetics, Fulgent Genetics RCV000764597 SCV000895694 uncertain significance Ehlers-Danlos syndrome, dermatosparaxis type 2018-10-31 criteria provided, single submitter clinical testing
Invitae RCV000764597 SCV001557543 uncertain significance Ehlers-Danlos syndrome, dermatosparaxis type 2022-02-18 criteria provided, single submitter clinical testing This sequence change replaces alanine, which is neutral and non-polar, with valine, which is neutral and non-polar, at codon 37 of the ADAMTS2 protein (p.Ala37Val). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with ADAMTS2-related conditions. ClinVar contains an entry for this variant (Variation ID: 392232). Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Tolerated"; PolyPhen-2: "Not Available"; Align-GVGD: "Class C0"). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may create or strengthen a splice site. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV002279219 SCV002565545 uncertain significance Ehlers-Danlos syndrome 2021-06-09 criteria provided, single submitter clinical testing
CeGaT Center for Human Genetics Tuebingen RCV000431296 SCV004158143 uncertain significance not provided 2022-04-01 criteria provided, single submitter clinical testing
Natera, Inc. RCV000764597 SCV001463008 uncertain significance Ehlers-Danlos syndrome, dermatosparaxis type 2020-01-24 no assertion criteria provided clinical testing

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