ClinVar Miner

Submissions for variant NM_014324.6(AMACR):c.317G>A (p.Arg106Lys)

gnomAD frequency: 0.00001  dbSNP: rs752862912
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001918235 SCV002179684 uncertain significance Alpha-methylacyl-CoA racemase deficiency 2020-12-10 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive, but these predictions have not been confirmed by published functional studies and their clinical significance is uncertain. This variant has not been reported in the literature in individuals with AMACR-related conditions. This variant is present in population databases (rs752862912, ExAC 0.01%). This sequence change replaces arginine with lysine at codon 106 of the AMACR protein (p.Arg106Lys). The arginine residue is highly conserved and there is a small physicochemical difference between arginine and lysine.
Ambry Genetics RCV002555430 SCV003574167 uncertain significance Inborn genetic diseases 2021-08-17 criteria provided, single submitter clinical testing The c.317G>A (p.R106K) alteration is located in exon 2 (coding exon 2) of the AMACR gene. This alteration results from a G to A substitution at nucleotide position 317, causing the arginine (R) at amino acid position 106 to be replaced by a lysine (K). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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