ClinVar Miner

Submissions for variant NM_014363.6(SACS):c.12597A>G (p.Pro4199=)

gnomAD frequency: 0.00451  dbSNP: rs112630127
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Total submissions: 7
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000228765 SCV000289950 benign Spastic paraplegia 2024-01-29 criteria provided, single submitter clinical testing
Illumina Laboratory Services, Illumina RCV000379249 SCV000383293 uncertain significance Charlevoix-Saguenay spastic ataxia 2018-01-12 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
Athena Diagnostics RCV000516975 SCV000614933 benign not specified 2016-09-09 criteria provided, single submitter clinical testing
GeneDx RCV001560895 SCV001783390 likely benign not provided 2020-12-05 criteria provided, single submitter clinical testing
Genome-Nilou Lab RCV000379249 SCV002026562 likely benign Charlevoix-Saguenay spastic ataxia 2021-09-05 criteria provided, single submitter clinical testing
Genome Diagnostics Laboratory, The Hospital for Sick Children RCV001847972 SCV002104979 likely benign Hereditary spastic paraplegia 2021-06-14 criteria provided, single submitter clinical testing
Natera, Inc. RCV000379249 SCV001453887 benign Charlevoix-Saguenay spastic ataxia 2020-05-19 no assertion criteria provided clinical testing

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