ClinVar Miner

Submissions for variant NM_014476.6(PDLIM3):c.387G>A (p.Pro129=)

gnomAD frequency: 0.00111  dbSNP: rs138670107
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Total submissions: 8
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
GeneDx RCV000127423 SCV000170987 benign not specified 2014-06-18 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000127423 SCV000269633 benign not specified 2015-04-13 criteria provided, single submitter clinical testing p.Pro129Pro in exon 4 of PDLIM3: This variant is not expected to have clinical s ignificance because it does not alter an amino acid residue and is not located w ithin the splice consensus sequence. It has been identified in 0.3% (192/66724) of European chromosomes by the Exome Aggregation Consortium (ExAC, http://exac.b roadinstitute.org; dbSNP rs138670107).
Labcorp Genetics (formerly Invitae), Labcorp RCV000464207 SCV000555694 benign Primary dilated cardiomyopathy; Hypertrophic cardiomyopathy 2024-12-30 criteria provided, single submitter clinical testing
Ambry Genetics RCV000127423 SCV002624257 likely benign not specified 2022-05-17 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: seen in unaffected individuals, population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
Breakthrough Genomics, Breakthrough Genomics RCV001701612 SCV005306564 benign not provided criteria provided, single submitter not provided
Genome Diagnostics Laboratory, University Medical Center Utrecht RCV001701612 SCV001932120 likely benign not provided no assertion criteria provided clinical testing
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ RCV001701612 SCV001954707 likely benign not provided no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV001701612 SCV001965287 likely benign not provided no assertion criteria provided clinical testing

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