ClinVar Miner

Submissions for variant NM_014646.2(LPIN2):c.1203T>G (p.Asp401Glu) (rs1018736752)

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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000644763 SCV000766471 uncertain significance Majeed syndrome 2017-08-24 criteria provided, single submitter clinical testing This sequence change replaces aspartic acid with glutamic acid at codon 401 of the LPIN2 protein (p.Asp401Glu). The aspartic acid residue is moderately conserved and there is a small physicochemical difference between aspartic acid and glutamic acid. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals with LPIN2-related disease. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The glutamic acid amino acid residue is found in multiple mammalian species, suggesting that this missense change does not adversely affect protein function. These predictions have not been confirmed by published functional studies and their clinical significance is uncertain. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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