ClinVar Miner

Submissions for variant NM_014780.5(CUL7):c.3991_3992del (p.Leu1331fs)

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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Women's Health and Genetics/Laboratory Corporation of America, LabCorp RCV003405083 SCV004121762 pathogenic 3-M syndrome 2023-10-17 criteria provided, single submitter clinical testing Variant summary: CUL7 c.3991_3992delCT (p.Leu1331GlufsX47) results in a premature termination codon, predicted to cause absence of the protein due to nonsense mediated decay, which is a commonly known mechanism for disease. The variant was absent in 251378 control chromosomes (gnomAD). To our knowledge, no occurrence of c.3991_3992delCT in individuals affected with Three M Syndrome 1 and no experimental evidence demonstrating its impact on protein function have been reported. No submitters have cited clinical-significance assessments for this variant to ClinVar after 2014. Based on the evidence outlined above, the variant was classified as pathogenic.
Labcorp Genetics (formerly Invitae), Labcorp RCV003669419 SCV004396766 pathogenic not provided 2023-07-28 criteria provided, single submitter clinical testing For these reasons, this variant has been classified as Pathogenic. This variant has not been reported in the literature in individuals affected with CUL7-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change creates a premature translational stop signal (p.Leu1331Glufs*47) in the CUL7 gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in CUL7 are known to be pathogenic (PMID: 16142236, 17675530, 19225462).

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