ClinVar Miner

Submissions for variant NM_014795.4(ZEB2):c.489C>T (p.Ile163=)

gnomAD frequency: 0.00277  dbSNP: rs138859323
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Total submissions: 11
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000081671 SCV000113602 benign not specified 2013-09-13 criteria provided, single submitter clinical testing
GeneDx RCV000081671 SCV000169860 benign not specified 2012-03-09 criteria provided, single submitter clinical testing This variant is considered likely benign or benign based on one or more of the following criteria: it is a conservative change, it occurs at a poorly conserved position in the protein, it is predicted to be benign by multiple in silico algorithms, and/or has population frequency not consistent with disease.
Genetic Services Laboratory, University of Chicago RCV000081671 SCV000195500 benign not specified 2015-09-30 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV003891565 SCV000312220 benign ZEB2-related condition 2023-10-25 criteria provided, single submitter clinical testing This variant is classified as benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Invitae RCV000353189 SCV000555854 benign Mowat-Wilson syndrome 2024-01-25 criteria provided, single submitter clinical testing
Athena Diagnostics Inc RCV000081671 SCV000616302 benign not specified 2017-06-26 criteria provided, single submitter clinical testing
Ambry Genetics RCV002311659 SCV000846720 likely benign Inborn genetic diseases 2016-04-19 criteria provided, single submitter clinical testing This alteration is classified as likely benign based on a combination of the following: population frequency, intact protein function, lack of segregation with disease, co-occurrence, RNA analysis, in silico models, amino acid conservation, lack of disease association in case-control studies, and/or the mechanism of disease or impacted region is inconsistent with a known cause of pathogenicity.
CeGaT Center for Human Genetics Tuebingen RCV001310434 SCV001500227 likely benign not provided 2024-02-01 criteria provided, single submitter clinical testing ZEB2: BP4, BP7, BS1
Genome-Nilou Lab RCV000353189 SCV002045707 benign Mowat-Wilson syndrome 2021-11-07 criteria provided, single submitter clinical testing
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen RCV000353189 SCV000734144 benign Mowat-Wilson syndrome no assertion criteria provided clinical testing
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center RCV001310434 SCV001967793 likely benign not provided no assertion criteria provided clinical testing

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