ClinVar Miner

Submissions for variant NM_014908.4(DOLK):c.1283A>C (p.Gln428Pro)

gnomAD frequency: 0.00004  dbSNP: rs189623590
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001209746 SCV001381196 uncertain significance DK1-congenital disorder of glycosylation 2022-04-11 criteria provided, single submitter clinical testing This sequence change replaces glutamine, which is neutral and polar, with proline, which is neutral and non-polar, at codon 428 of the DOLK protein (p.Gln428Pro). This variant is present in population databases (rs189623590, gnomAD 0.02%). This variant has not been reported in the literature in individuals affected with DOLK-related conditions. ClinVar contains an entry for this variant (Variation ID: 940209). Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV002379795 SCV002695740 uncertain significance Cardiovascular phenotype 2022-06-14 criteria provided, single submitter clinical testing The p.Q428P variant (also known as c.1283A>C), located in coding exon 1 of the DOLK gene, results from an A to C substitution at nucleotide position 1283. The glutamine at codon 428 is replaced by proline, an amino acid with similar properties. This amino acid position is not well conserved in available vertebrate species. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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