ClinVar Miner

Submissions for variant NM_014956.5(CEP164):c.3416G>A (p.Arg1139His)

dbSNP: rs143802594
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001240764 SCV001413735 uncertain significance Nephronophthisis 15 2021-11-01 criteria provided, single submitter clinical testing This variant is present in population databases (rs143802594, gnomAD 0.01%). This sequence change replaces arginine, which is basic and polar, with histidine, which is basic and polar, at codon 1139 of the CEP164 protein (p.Arg1139His). This variant has not been reported in the literature in individuals affected with CEP164-related conditions. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Deleterious"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The histidine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. ClinVar contains an entry for this variant (Variation ID: 966155).

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