ClinVar Miner

Submissions for variant NM_015272.5(RPGRIP1L):c.747G>C (p.Gln249His)

gnomAD frequency: 0.00001  dbSNP: rs1970020650
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001947580 SCV002175623 uncertain significance Familial aplasia of the vermis; Meckel-Gruber syndrome 2022-07-09 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be tolerated. ClinVar contains an entry for this variant (Variation ID: 1401620). This variant has not been reported in the literature in individuals affected with RPGRIP1L-related conditions. This variant is not present in population databases (gnomAD no frequency). This sequence change replaces glutamine, which is neutral and polar, with histidine, which is basic and polar, at codon 249 of the RPGRIP1L protein (p.Gln249His).
Fulgent Genetics, Fulgent Genetics RCV002482787 SCV002784415 uncertain significance Joubert syndrome 7; Meckel syndrome, type 5; COACH syndrome 3 2022-05-25 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV004728917 SCV005339822 uncertain significance RPGRIP1L-related disorder 2024-06-10 no assertion criteria provided clinical testing The RPGRIP1L c.747G>C variant is predicted to result in the amino acid substitution p.Gln249His. To our knowledge, this variant has not been reported in the literature or in a large population database, indicating this variant is rare. At this time, the clinical significance of this variant is uncertain due to the absence of conclusive functional and genetic evidence.

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