ClinVar Miner

Submissions for variant NM_015512.5(DNAH1):c.10958T>C (p.Ile3653Thr)

gnomAD frequency: 0.00004  dbSNP: rs780417209
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000548082 SCV000660193 uncertain significance Spermatogenic failure 18; Ciliary dyskinesia, primary, 37 2022-09-01 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Possibly Damaging"; Align-GVGD: "Class C0"). ClinVar contains an entry for this variant (Variation ID: 478393). This variant has not been reported in the literature in individuals affected with DNAH1-related conditions. The frequency data for this variant in the population databases is considered unreliable, as metrics indicate poor data quality at this position in the gnomAD database. This sequence change replaces isoleucine, which is neutral and non-polar, with threonine, which is neutral and polar, at codon 3653 of the DNAH1 protein (p.Ile3653Thr).
GeneDx RCV002461366 SCV002757680 uncertain significance not provided 2022-05-25 criteria provided, single submitter clinical testing Not observed at significant frequency in large population cohorts (gnomAD); In silico analysis supports that this missense variant has a deleterious effect on protein structure/function; Has not been previously published as pathogenic or benign to our knowledge

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