ClinVar Miner

Submissions for variant NM_015512.5(DNAH1):c.4108G>A (p.Glu1370Lys)

gnomAD frequency: 0.00019  dbSNP: rs201610799
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000687541 SCV000815114 uncertain significance Spermatogenic failure 18; Ciliary dyskinesia, primary, 37 2022-08-06 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The lysine amino acid residue is found in multiple mammalian species, which suggests that this missense change does not adversely affect protein function. ClinVar contains an entry for this variant (Variation ID: 567451). This variant has not been reported in the literature in individuals affected with DNAH1-related conditions. This variant is present in population databases (rs201610799, gnomAD 0.04%). This sequence change replaces glutamic acid, which is acidic and polar, with lysine, which is basic and polar, at codon 1370 of the DNAH1 protein (p.Glu1370Lys).
PreventionGenetics, part of Exact Sciences RCV003420217 SCV004115048 uncertain significance DNAH1-related condition 2023-03-14 criteria provided, single submitter clinical testing The DNAH1 c.4108G>A variant is predicted to result in the amino acid substitution p.Glu1370Lys. To our knowledge, this variant has not been reported in the literature. This variant is reported in 0.037% of alleles in individuals of European (Non-Finnish) descent in gnomAD (http://gnomad.broadinstitute.org/variant/3-52392595-G-A). At this time, the clinical significance of this variant is uncertain due to the absence of conclusive functional and genetic evidence.

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