ClinVar Miner

Submissions for variant NM_015599.3(PGM3):c.212A>G (p.Asn71Ser)

gnomAD frequency: 0.00002  dbSNP: rs755618669
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV001928660 SCV002190258 uncertain significance Immunodeficiency 23 2022-08-22 criteria provided, single submitter clinical testing This sequence change replaces asparagine, which is neutral and polar, with serine, which is neutral and polar, at codon 99 of the PGM3 protein (p.Asn99Ser). This variant is present in population databases (rs755618669, gnomAD 0.01%). This variant has not been reported in the literature in individuals affected with PGM3-related conditions. ClinVar contains an entry for this variant (Variation ID: 1414436). Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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