ClinVar Miner

Submissions for variant NM_015978.3(TNNI3K):c.538G>T (p.Glu180Ter)

dbSNP: rs746684996
Minimum review status: Collection method:
Minimum conflict level:
ClinVar version:
Total submissions: 2
Download table as spreadsheet
Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Diagnostics Services (NGS), CSIR - Centre For Cellular And Molecular Biology RCV002465038 SCV002759431 likely pathogenic Atrial conduction disease 2022-08-11 criteria provided, single submitter clinical testing The c.538G>T variant is not present in publicly available population databases like 1000 Genomes and Exome Variant Server (EVS) and Indian Exome Database. The variant is present in Exome Aggregation Consortium (ExAC) and Genome Aggregation Database (gnomAD), at a low frequency. The variant not present in our in-house exome database. This variant has not been published in literature or reported to clinical databases like ClinVar, Human Genome Mutation Database (HGMD) and OMIM, in any affected individuals. In-silico pathogenicity prediction programs like MutationTaster2, CADD, Varsome, Franklin etc. predicted this variant to be likely deleterious. This alteration is expected to result in loss of function by premature protein truncation or nonsense-mediated mRNA decay.
Labcorp Genetics (formerly Invitae), Labcorp RCV002573562 SCV003339937 uncertain significance not provided 2022-04-15 criteria provided, single submitter clinical testing This variant has not been reported in the literature in individuals affected with TNNI3K-related conditions. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. This variant is present in population databases (rs746684996, gnomAD 0.01%). This sequence change creates a premature translational stop signal (p.Glu180*) in the TNNI3K gene. It is expected to result in an absent or disrupted protein product. However, the current clinical and genetic evidence is not sufficient to establish whether loss-of-function variants in TNNI3K cause disease.

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.