ClinVar Miner

Submissions for variant NM_016008.4(DYNC2LI1):c.619C>T (p.Arg207Ter)

gnomAD frequency: 0.00003  dbSNP: rs745930390
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001857844 SCV002238933 pathogenic not provided 2024-01-24 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Arg207*) in the DYNC2LI1 gene. It is expected to result in an absent or disrupted protein product. Loss-of-function variants in DYNC2LI1 are known to be pathogenic (PMID: 26077881, 26130459). This variant is present in population databases (rs745930390, gnomAD 0.04%). This premature translational stop signal has been observed in individual(s) with clinical features of DYNC2LI1-related conditions (PMID: 26130459). This variant is also known as p.Arg208Ter. ClinVar contains an entry for this variant (Variation ID: 253218). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site. For these reasons, this variant has been classified as Pathogenic.
OMIM RCV000239659 SCV000298012 pathogenic Short-rib thoracic dysplasia 15 with polydactyly 2018-04-06 no assertion criteria provided literature only

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