ClinVar Miner

Submissions for variant NM_016023.5(OTUD6B):c.658G>A (p.Val220Ile)

gnomAD frequency: 0.00169  dbSNP: rs143121527
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000879625 SCV001022670 likely benign not provided 2019-02-27 criteria provided, single submitter clinical testing
Fulgent Genetics, Fulgent Genetics RCV002507549 SCV002807323 likely benign Intellectual developmental disorder with dysmorphic facies, seizures, and distal limb anomalies 2021-08-06 criteria provided, single submitter clinical testing
Ambry Genetics RCV002539285 SCV003754793 uncertain significance Inborn genetic diseases 2020-10-29 criteria provided, single submitter clinical testing The c.748G>A (p.V250I) alteration is located in exon 5 (coding exon 5) of the OTUD6B gene. This alteration results from a G to A substitution at nucleotide position 748, causing the valine (V) at amino acid position 250 to be replaced by an isoleucine (I). Based on data from the Genome Aggregation Database (gnomAD) database, the OTUD6B c.748G>A alteration was observed in 0.14% (387/268968) of total alleles studied, with a frequency of 0.26% (315/121800) in the European (non-Finnish) subpopulation. This amino acid position is not well conserved and isoleucine (I) is the reference amino acid in several species. The p.V250I alteration is predicted to be tolerated by in silico analysis. Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.
CeGaT Center for Human Genetics Tuebingen RCV000879625 SCV004184739 likely benign not provided 2023-11-01 criteria provided, single submitter clinical testing OTUD6B: BP4
Breakthrough Genomics, Breakthrough Genomics RCV000879625 SCV005221709 likely benign not provided criteria provided, single submitter not provided

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