ClinVar Miner

Submissions for variant NM_016169.4(SUFU):c.158A>G (p.Gln53Arg)

dbSNP: rs1589970174
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000794727 SCV000934153 uncertain significance Gorlin syndrome; Medulloblastoma 2019-04-11 criteria provided, single submitter clinical testing In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. Algorithms developed to predict the effect of missense changes on protein structure and function are either unavailable or do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Possibly Damaging"; Align-GVGD: "Class C0"). This variant has not been reported in the literature in individuals with SUFU-related disease. This variant is not present in population databases (ExAC no frequency). This sequence change replaces glutamine with arginine at codon 53 of the SUFU protein (p.Gln53Arg). The glutamine residue is highly conserved and there is a small physicochemical difference between glutamine and arginine.
Ambry Genetics RCV002397581 SCV002705700 uncertain significance Hereditary cancer-predisposing syndrome 2022-02-02 criteria provided, single submitter clinical testing The p.Q53R variant (also known as c.158A>G), located in coding exon 1 of the SUFU gene, results from an A to G substitution at nucleotide position 158. The glutamine at codon 53 is replaced by arginine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be deleterious by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

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