ClinVar Miner

Submissions for variant NM_016203.4(PRKAG2):c.43T>C (p.Ser15Pro)

dbSNP: rs1563775284
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV000694065 SCV000822492 uncertain significance Lethal congenital glycogen storage disease of heart 2018-05-16 criteria provided, single submitter clinical testing Algorithms developed to predict the effect of missense changes on protein structure and function output the following: SIFT: "Tolerated"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0". The proline amino acid residue is found in multiple mammalian species, suggesting that this missense change does not adversely affect protein function. These predictions have not been confirmed by published functional studies and their clinical significance is uncertain. This variant has not been reported in the literature in individuals with PRKAG2-related disease. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance. This variant is not present in population databases (ExAC no frequency). This sequence change replaces serine with proline at codon 15 of the PRKAG2 protein (p.Ser15Pro). The serine residue is weakly conserved and there is a moderate physicochemical difference between serine and proline.

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