ClinVar Miner

Submissions for variant NM_016239.4(MYO15A):c.7367C>G (p.Ala2456Gly)

gnomAD frequency: 0.00015  dbSNP: rs199953758
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine RCV000151408 SCV000199419 uncertain significance not specified 2015-05-05 criteria provided, single submitter clinical testing The p.Ala2456Gly variant in MYO15A has been previously identified by our laborat ory in the heterozygous state in two individuals with hearing loss (LMM unpublis hed data). This variant has been identified in 0.1% (23/24442) of European chro mosomes by the Exome Aggregation Consortium (ExAC, http://exac.broadinstitute.or g; dbSNP rs199953758); however, its frequency is not high enough to rule out a p athogenic role. Computational prediction tools and conservation analyses do not provide strong support for or against an impact to the protein. In summary, the clinical significance of the Ala2456Gly variant is uncertain.
Illumina Laboratory Services, Illumina RCV000477852 SCV000401175 uncertain significance Autosomal recessive nonsyndromic hearing loss 3 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
Labcorp Genetics (formerly Invitae), Labcorp RCV000958415 SCV001105256 likely benign not provided 2024-01-31 criteria provided, single submitter clinical testing
PreventionGenetics, part of Exact Sciences RCV003965127 SCV004792102 benign MYO15A-related disorder 2020-07-13 criteria provided, single submitter clinical testing This variant is classified as benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).
Division of Human Genetics, Children's Hospital of Philadelphia RCV000477852 SCV000536818 uncertain significance Autosomal recessive nonsyndromic hearing loss 3 2015-07-25 no assertion criteria provided research

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