ClinVar Miner

Submissions for variant NM_016239.4(MYO15A):c.8375T>C (p.Val2792Ala)

gnomAD frequency: 0.00001  dbSNP: rs983107737
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Molecular Diagnosis Center for Deafness RCV001254926 SCV001332618 pathogenic Autosomal recessive nonsyndromic hearing loss 3 2020-02-27 criteria provided, single submitter case-control
Invitae RCV003558740 SCV004298166 pathogenic not provided 2023-11-14 criteria provided, single submitter clinical testing This sequence change replaces valine, which is neutral and non-polar, with alanine, which is neutral and non-polar, at codon 2792 of the MYO15A protein (p.Val2792Ala). This variant is present in population databases (no rsID available, gnomAD 0.007%). This missense change has been observed in individual(s) with deafness (PMID: 24206587, 36401330). It has also been observed to segregate with disease in related individuals. ClinVar contains an entry for this variant (Variation ID: 915471). Advanced modeling of protein sequence and biophysical properties (such as structural, functional, and spatial information, amino acid conservation, physicochemical variation, residue mobility, and thermodynamic stability) performed at Invitae indicates that this missense variant is expected to disrupt MYO15A protein function with a positive predictive value of 95%. For these reasons, this variant has been classified as Pathogenic.

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