Submissions for variant NM_017617.5(NOTCH1):c.5716G>A (p.Ala1906Thr) (rs779880917)

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Total submissions: 1

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Submitter	RCV	SCV	Clinical significance	Condition	Last evaluated	Review status	Method	Comment
Invitae	RCV000655270	SCV000777200	uncertain significance	Adams-Oliver syndrome 5	2018-01-02	criteria provided, single submitter	clinical testing	This sequence change replaces alanine with threonine at codon 1906 of the NOTCH1 protein (p.Ala1906Thr). The alanine residue is highly conserved and there is a small physicochemical difference between alanine and threonine. This variant is not present in population databases (ExAC no frequency). This variant has not been reported in the literature in individuals with NOTCH1-related disease. Algorithms developed to predict the effect of missense changes on protein structure and function do not agree on the potential impact of this missense change (SIFT: "Deleterious"; PolyPhen-2: "Benign"; Align-GVGD: "Class C0"). In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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