ClinVar Miner

Submissions for variant NM_017671.5(FERMT1):c.863G>A (p.Arg288Gln)

gnomAD frequency: 0.00020  dbSNP: rs202037230
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Illumina Laboratory Services, Illumina RCV001143192 SCV001303698 uncertain significance Kindler syndrome 2017-05-15 criteria provided, single submitter clinical testing This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). Publications were found based on this search. However, the evidence from the literature, in combination with allele frequency data from public databases where available, was not sufficient to rule this variant in or out of causing disease. Therefore, this variant is classified as a variant of unknown significance.
Invitae RCV002032356 SCV002182434 uncertain significance not provided 2022-01-22 criteria provided, single submitter clinical testing This sequence change replaces arginine, which is basic and polar, with glutamine, which is neutral and polar, at codon 288 of the FERMT1 protein (p.Arg288Gln). This variant is present in population databases (rs202037230, gnomAD 0.03%). This variant has not been reported in the literature in individuals affected with FERMT1-related conditions. ClinVar contains an entry for this variant (Variation ID: 898989). Algorithms developed to predict the effect of missense changes on protein structure and function (SIFT, PolyPhen-2, Align-GVGD) all suggest that this variant is likely to be disruptive. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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