ClinVar Miner

Submissions for variant NM_017849.4(TMEM127):c.10C>T (p.Pro4Ser)

gnomAD frequency: 0.00001  dbSNP: rs1024081498
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Total submissions: 3
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Labcorp Genetics (formerly Invitae), Labcorp RCV000639346 SCV000760918 uncertain significance Hereditary pheochromocytoma-paraganglioma 2023-09-26 criteria provided, single submitter clinical testing This sequence change replaces proline, which is neutral and non-polar, with serine, which is neutral and polar, at codon 4 of the TMEM127 protein (p.Pro4Ser). This variant is not present in population databases (gnomAD no frequency). This variant has not been reported in the literature in individuals affected with TMEM127-related conditions. ClinVar contains an entry for this variant (Variation ID: 532515). Experimental studies and prediction algorithms are not available or were not evaluated, and the functional significance of this variant is currently unknown. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
Ambry Genetics RCV001017295 SCV001178357 uncertain significance Hereditary cancer-predisposing syndrome 2023-11-20 criteria provided, single submitter clinical testing The p.P4S variant (also known as c.10C>T), located in coding exon 1 of the TMEM127 gene, results from a C to T substitution at nucleotide position 10. The proline at codon 4 is replaced by serine, an amino acid with similar properties. This amino acid position is highly conserved in available vertebrate species. In addition, the in silico prediction for this alteration is inconclusive. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.
Baylor Genetics RCV003472007 SCV004203879 uncertain significance Pheochromocytoma 2023-10-31 criteria provided, single submitter clinical testing

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