ClinVar Miner

Submissions for variant NM_017866.6(TMEM70):c.769A>T (p.Lys257Ter)

gnomAD frequency: 0.00003  dbSNP: rs200138286
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Total submissions: 2
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV001063823 SCV001228686 uncertain significance Mitochondrial complex V (ATP synthase) deficiency nuclear type 2 2022-08-23 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Lys257*) in the TMEM70 gene. While this is not anticipated to result in nonsense mediated decay, it is expected to disrupt the last 4 amino acid(s) of the TMEM70 protein. This variant is present in population databases (rs200138286, gnomAD 0.006%). This variant has not been reported in the literature in individuals affected with TMEM70-related conditions. ClinVar contains an entry for this variant (Variation ID: 858028). Experimental studies and prediction algorithms are not available or were not evaluated, and the functional significance of this variant is currently unknown. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.
GeneDx RCV001585966 SCV001812140 uncertain significance not provided 2021-06-17 criteria provided, single submitter clinical testing Not observed at a significant frequency in large population cohorts (Lek et al., 2016); Nonsense variant predicted to result in protein truncation as the last 4 amino acids are lost, although loss-of-function variants have not been reported downstream of this position in the protein; Has not been previously published as pathogenic or benign to our knowledge; This variant is associated with the following publications: (PMID: 27535533)

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