ClinVar Miner

Submissions for variant NM_017986.4(SLC52A1):c.1062del (p.Tyr355fs)

dbSNP: rs537206157
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Total submissions: 1
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Invitae RCV002235126 SCV000960342 uncertain significance Ariboflavinosis 2024-01-22 criteria provided, single submitter clinical testing This sequence change creates a premature translational stop signal (p.Tyr355Thrfs*2) in the SLC52A1 gene. It is expected to result in an absent or disrupted protein product. However, the current clinical and genetic evidence is not sufficient to establish whether loss-of-function variants in SLC52A1 cause disease. This variant is present in population databases (rs537206157, gnomAD 0.2%), and has an allele count higher than expected for a pathogenic variant. This variant has not been reported in the literature in individuals affected with SLC52A1-related conditions. ClinVar contains an entry for this variant (Variation ID: 662101). Algorithms developed to predict the effect of sequence changes on RNA splicing suggest that this variant may disrupt the consensus splice site. In summary, the available evidence is currently insufficient to determine the role of this variant in disease. Therefore, it has been classified as a Variant of Uncertain Significance.

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