ClinVar Miner

Submissions for variant NM_018075.5(ANO10):c.837A>T (p.Arg279Ser)

gnomAD frequency: 0.00014  dbSNP: rs374795191
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Total submissions: 4
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Illumina Laboratory Services, Illumina RCV001147920 SCV001308777 uncertain significance Autosomal recessive spinocerebellar ataxia 10 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
Institute of Human Genetics, University of Leipzig Medical Center RCV001147920 SCV001440356 uncertain significance Autosomal recessive spinocerebellar ataxia 10 2019-01-01 criteria provided, single submitter clinical testing
Athena Diagnostics RCV001287984 SCV001474758 uncertain significance not provided 2023-04-27 criteria provided, single submitter clinical testing Available data are insufficient to determine the clinical significance of the variant at this time. The frequency of this variant in the general population is higher than would generally be expected for pathogenic variants in this gene (http://gnomad.broadinstitute.org). Computational tools disagree on the variant's effect on normal protein function.
Ambry Genetics RCV003163329 SCV003866826 uncertain significance Inborn genetic diseases 2023-03-02 criteria provided, single submitter clinical testing The c.837A>T (p.R279S) alteration is located in exon 6 (coding exon 5) of the ANO10 gene. This alteration results from a A to T substitution at nucleotide position 837, causing the arginine (R) at amino acid position 279 to be replaced by a serine (S). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

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