Total submissions: 2
Submitter | RCV | SCV | Clinical significance | Condition | Last evaluated | Review status | Method | Comment |
---|---|---|---|---|---|---|---|---|
Gene |
RCV001587467 | SCV001825059 | pathogenic | not provided | 2019-07-31 | criteria provided, single submitter | clinical testing | Nonsense variant predicted to result in protein truncation or nonsense mediated decay in a gene for which loss-of-function is a known mechanism of disease; Not observed at a significant frequency in large population cohorts (Lek et al., 2016); Has not been previously published as pathogenic or benign to our knowledge |
Gene Discovery Core- |
RCV001548761 | SCV001768723 | pathogenic | Leukoencephalopathy with brain stem and spinal cord involvement-high lactate syndrome | 2020-02-14 | no assertion criteria provided | research | This variant is interpretted as Pathogenic for Leukoencephalopathy, brain & spine involvement, lactate elevation; Autosomal recessive; PVS1 - null variant (nonsense, frameshift, canonical splice sites, initiation codon, single or multiexon deletion) in a gene where LOF is a known mechanism of disease. PM2 - Absent from controls (or at extremely low frequency if recessive) in Exome Sequencing Project, 1000 Genomes Project, or Exome Aggregation Consortium. PP3 - Multiple lines of computational evidence support a deleterious effect on the gene or gene product |