ClinVar Miner

Submissions for variant NM_018319.4(TDP1):c.208T>A (p.Ser70Thr)

gnomAD frequency: 0.00014  dbSNP: rs140058160
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Total submissions: 5
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Submitter RCV SCV Clinical significance Condition Last evaluated Review status Method Comment
Eurofins Ntd Llc (ga) RCV000177303 SCV000229149 uncertain significance not provided 2014-12-02 criteria provided, single submitter clinical testing
Athena Diagnostics RCV000177303 SCV001146148 uncertain significance not provided 2023-01-03 criteria provided, single submitter clinical testing Available data are insufficient to determine the clinical significance of the variant at this time. The frequency of this variant in the general population is uninformative in assessment of its pathogenicity (http://gnomad.broadinstitute.org). Computational tools predict that this variant is not damaging.
Illumina Laboratory Services, Illumina RCV001117926 SCV001276166 uncertain significance Spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 1 2018-01-13 criteria provided, single submitter clinical testing This variant was observed in the ICSL laboratory as part of a predisposition screen in an ostensibly healthy population. It had not been previously curated by ICSL or reported in the Human Gene Mutation Database (HGMD: prior to June 1st, 2018), and was therefore a candidate for classification through an automated scoring system. Utilizing variant allele frequency, disease prevalence and penetrance estimates, and inheritance mode, an automated score was calculated to assess if this variant is too frequent to cause the disease. Based on the score, this variant could not be ruled out of causing disease and therefore its association with disease required further investigation. A literature search was performed for the gene, cDNA change, and amino acid change (if applicable). No publications were found based on this search. This variant was therefore classified as a variant of unknown significance for this disease.
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories RCV001117926 SCV004563329 uncertain significance Spinocerebellar ataxia, autosomal recessive, with axonal neuropathy 1 2023-10-03 criteria provided, single submitter clinical testing The TDP1 c.208T>A; p.Ser70Thr variant (rs140058160), to our knowledge, is not reported in the medical literature but is reported in ClinVar (Variation ID: 196488). This variant is observed in the general population with an overall allele frequency 0.01% (34/282870 alleles) in the Genome Aggregation Database. Computational analyses predict that this variant is neutral (REVEL: 0.014). Due to limited information, the clinical significance of this variant is uncertain at this time.
Mayo Clinic Laboratories, Mayo Clinic RCV000177303 SCV005409794 uncertain significance not provided 2023-10-26 criteria provided, single submitter clinical testing BP4, PM2_moderate

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